CDS

Accession Number TCMCG006C92950
gbkey CDS
Protein Id XP_013677334.1
Location join(51815150..51815392,51815456..51815596,51815687..51815890,51815987..51816075,51816167..51816218,51816307..51816402,51816483..51816527,51816607..51816696,51816778..51816849,51816928..51817056)
Gene LOC106381942
GeneID 106381942
Organism Brassica napus

Protein

Length 386aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013821880.2
Definition farnesyl pyrophosphate synthase 2-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category H
Description Belongs to the FPP GGPP synthase family
KEGG_TC -
KEGG_Module M00366        [VIEW IN KEGG]
M00367        [VIEW IN KEGG]
KEGG_Reaction R01658        [VIEW IN KEGG]
R02003        [VIEW IN KEGG]
KEGG_rclass RC00279        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01006        [VIEW IN KEGG]
KEGG_ko ko:K00787        [VIEW IN KEGG]
EC 2.5.1.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
2.5.1.10        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00900        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko05164        [VIEW IN KEGG]
ko05166        [VIEW IN KEGG]
map00900        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map05164        [VIEW IN KEGG]
map05166        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004161        [VIEW IN EMBL-EBI]
GO:0004337        [VIEW IN EMBL-EBI]
GO:0004659        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006644        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0008654        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016765        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045337        [VIEW IN EMBL-EBI]
GO:0045338        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090407        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTGTGAGTGGTTGTTGTAGGAATCTGAGAATCACAATAAAGGCTGTGCTGCATTTACGTCTCAGGCCTCCTCGTGGATCCAGTCCCTATCGTCGTATCCGAAGTAGGCACCTTTCCTCCTCCTCTTCAATGGCGGATCTCAAGTCAACCTTCCTCAACGTCTACTCCACCCTCAAATCCGACCTCCTTCACGACCCTTCCTTCGAATTCACCGATGCATCACGTCTCTGGGTCGAAAAGATGTTGGATTACAATGTACCTGGAGGGAAGCTGAATCGTGGTCTCTCAGTCGTGGACAGCTTCAAGCTTTTGAAGGAAGGTGAAGATTTGACCGAGGAAGAGGTTTTTCTCTCGTGTGCTCTTGGTTGGTGCATCGAATGGCTTCAAGCTTATTTCCTTGTGCTTGATGACATTATGGATAACTCTGTCACTCGACGTGGACAACCTTGCTGGTTCAGAGTTCCTCAGGTTGGTATGGTTGCCATCAACGACGGGATCTTACTTCGCAATCACATCCACAGGATCCTCAAGAAGCATTTCAGGGGAAAGCCTTACTATGTTGACCTCGTTGATCTCTTTAATGAGGTAGAGATGCAAACAGCTTGCGGCCAGATGATTGATCTGATCACCACCTTCGAAGGCGAAAAGGATTTGGCCAAGTACTCATTGCCAATTCACCGGCGTATTGTCCAATACAAAACGGCTTATTACTCATTTTATCTCCCTGTTGCTTGTGCGTTACTTATGGCGGGCGAGAACTTGGAAAACCATATTGATGTGAAGAATGTTCTTGTTGACATGGGGATCTACTTCCAAGTGCAGGATGATTATCTGGATTGTTTTGCTGATCCAGAGACACTTGGCAAGATAGGAACTGATATAGAAGACTTTAAATGCTCCTGGTTGGTGGTAAAGGCATTGGAACGCTGCAGCAAAGAACAAACTGAGATATTATATGAGAACTACGGTAAACCAGACCCATCAAACGTTGCTAAAGTGAAGGAGCTTTACAAAGAGCTTGACCTTGAGGGAGTGTTCAAGGAGTATGAGAGCAAAAGCTACGAGAAGCTGACTGGAGTGATTGAGGCTCACAAAAGTAAAGCTATCCAAGCAGTGCTCAAATCCTTCTTGGCTAAGATCTACAAGAGGCAGAAGTAG
Protein:  
MSVSGCCRNLRITIKAVLHLRLRPPRGSSPYRRIRSRHLSSSSSMADLKSTFLNVYSTLKSDLLHDPSFEFTDASRLWVEKMLDYNVPGGKLNRGLSVVDSFKLLKEGEDLTEEEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRGKPYYVDLVDLFNEVEMQTACGQMIDLITTFEGEKDLAKYSLPIHRRIVQYKTAYYSFYLPVACALLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSKEQTEILYENYGKPDPSNVAKVKELYKELDLEGVFKEYESKSYEKLTGVIEAHKSKAIQAVLKSFLAKIYKRQK